Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Gm28659-201ENSMUST00000188013 759 ntBASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Rps4l-201ENSMUST00000071745 943 ntBASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Gm7230-201ENSMUST00000173026 815 ntBASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Gm6550-201ENSMUST00000187574 993 ntBASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Gm5864-201ENSMUST00000202263 970 ntBASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim13Q9CYB0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms