Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Gm14140-201ENSMUST00000119999 995 ntBASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.36□□□□□ -0.27
Ska1Q9CPV1 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Gm27741-201ENSMUST00000185060 237 ntBASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Gm2451-201ENSMUST00000199447 999 ntBASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Gm10290-201ENSMUST00000200451 999 ntBASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Gm10154-201ENSMUST00000084445 354 ntBASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Thap2-203ENSMUST00000218989 527 ntBASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska1Q9CPV1 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Gm16026-204ENSMUST00000162652 683 ntBASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ska1Q9CPV1 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms