Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.39□□□□□ -0.27
Chmp1b1Q99LU0 Gm27494-201ENSMUST00000184735 189 ntBASIC13.39□□□□□ -0.27
Chmp1b1Q99LU0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1b1Q99LU0 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.39□□□□□ -0.27
Chmp1b1Q99LU0 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.39□□□□□ -0.27
Chmp1b1Q99LU0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1b1Q99LU0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1b1Q99LU0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1b1Q99LU0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1b1Q99LU0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1b1Q99LU0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1b1Q99LU0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Chmp1b1Q99LU0 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1b1Q99LU0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1b1Q99LU0 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1b1Q99LU0 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Chmp1b1Q99LU0 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1b1Q99LU0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1b1Q99LU0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1b1Q99LU0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Chmp1b1Q99LU0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Gm20553-201ENSMUST00000204205 844 ntBASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.38□□□□□ -0.27
Chmp1b1Q99LU0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Gm18737-201ENSMUST00000173594 937 ntBASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Gm18057-201ENSMUST00000208220 503 ntBASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms