Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Gm11594-201ENSMUST00000122313 162 ntBASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga3Q91XY5 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga3Q91XY5 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga3Q91XY5 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga3Q91XY5 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga3Q91XY5 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga3Q91XY5 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pcdhga3Q91XY5 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhga3Q91XY5 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdhga3Q91XY5 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga3Q91XY5 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga3Q91XY5 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga3Q91XY5 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga3Q91XY5 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhga3Q91XY5 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga3Q91XY5 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdhga3Q91XY5 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga3Q91XY5 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga3Q91XY5 Gm4995-201ENSMUST00000117247 432 ntBASIC12.6□□□□□ -0.39
Pcdhga3Q91XY5 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga3Q91XY5 Gm37230-201ENSMUST00000194491 818 ntBASIC12.6□□□□□ -0.39
Pcdhga3Q91XY5 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdhga3Q91XY5 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms