Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga6Q91XY2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga6Q91XY2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga6Q91XY2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga6Q91XY2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga6Q91XY2 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga6Q91XY2 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.08□□□□□ -0.15
Pcdhga6Q91XY2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhga6Q91XY2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhga6Q91XY2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhga6Q91XY2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm27701-201ENSMUST00000184498 110 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm29310-201ENSMUST00000185468 696 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm21825-201ENSMUST00000185728 696 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm29109-201ENSMUST00000185895 696 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm21896-201ENSMUST00000186520 696 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm21873-201ENSMUST00000186728 696 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm21794-201ENSMUST00000187056 696 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm21880-201ENSMUST00000187275 696 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm21826-201ENSMUST00000187451 696 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm21198-201ENSMUST00000188393 696 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm21749-201ENSMUST00000189343 696 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm21901-201ENSMUST00000189568 696 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm29424-201ENSMUST00000189716 696 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm28599-201ENSMUST00000189838 694 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm21867-201ENSMUST00000189917 696 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm29269-201ENSMUST00000190087 696 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm21722-201ENSMUST00000190153 696 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm28423-201ENSMUST00000190701 696 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm21899-201ENSMUST00000190745 696 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm21910-201ENSMUST00000191163 696 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm21849-201ENSMUST00000191571 696 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm28678-201ENSMUST00000191593 696 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm20910-201ENSMUST00000193268 696 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm21871-201ENSMUST00000194621 696 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms