Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.13■□□□□ 0.17
Trex1Q91XB0 Gm26464-201ENSMUST00000157094 305 ntBASIC16.13■□□□□ 0.17
Trex1Q91XB0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trex1Q91XB0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trex1Q91XB0 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trex1Q91XB0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trex1Q91XB0 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trex1Q91XB0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trex1Q91XB0 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.13■□□□□ 0.17
Trex1Q91XB0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trex1Q91XB0 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.13■□□□□ 0.17
Trex1Q91XB0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trex1Q91XB0 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trex1Q91XB0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trex1Q91XB0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trex1Q91XB0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trex1Q91XB0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trex1Q91XB0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trex1Q91XB0 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trex1Q91XB0 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.12■□□□□ 0.17
Trex1Q91XB0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trex1Q91XB0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trex1Q91XB0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.12■□□□□ 0.17
Trex1Q91XB0 Gm15429-201ENSMUST00000151268 798 ntBASIC16.12■□□□□ 0.17
Trex1Q91XB0 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trex1Q91XB0 Gm27839-201ENSMUST00000184242 106 ntBASIC16.12■□□□□ 0.17
Trex1Q91XB0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.12■□□□□ 0.17
Trex1Q91XB0 Gm8463-201ENSMUST00000208573 613 ntBASIC16.12■□□□□ 0.17
Trex1Q91XB0 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trex1Q91XB0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trex1Q91XB0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trex1Q91XB0 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.12■□□□□ 0.17
Trex1Q91XB0 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trex1Q91XB0 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trex1Q91XB0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trex1Q91XB0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trex1Q91XB0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trex1Q91XB0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trex1Q91XB0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trex1Q91XB0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.11■□□□□ 0.17
Trex1Q91XB0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trex1Q91XB0 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.11■□□□□ 0.17
Trex1Q91XB0 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.11■□□□□ 0.17
Trex1Q91XB0 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.11■□□□□ 0.17
Trex1Q91XB0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trex1Q91XB0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trex1Q91XB0 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.11■□□□□ 0.17
Trex1Q91XB0 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.11■□□□□ 0.17
Trex1Q91XB0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.11■□□□□ 0.17
Trex1Q91XB0 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trex1Q91XB0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.1■□□□□ 0.17
Trex1Q91XB0 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Gm13689-201ENSMUST00000119360 685 ntBASIC16.1■□□□□ 0.17
Trex1Q91XB0 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.1■□□□□ 0.17
Trex1Q91XB0 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.1■□□□□ 0.17
Trex1Q91XB0 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms