Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm14494-201ENSMUST00000118786 435 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm29310-201ENSMUST00000185468 696 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm21825-201ENSMUST00000185728 696 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm29109-201ENSMUST00000185895 696 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm21896-201ENSMUST00000186520 696 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm21873-201ENSMUST00000186728 696 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm21794-201ENSMUST00000187056 696 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm21880-201ENSMUST00000187275 696 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm21826-201ENSMUST00000187451 696 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm21198-201ENSMUST00000188393 696 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm21749-201ENSMUST00000189343 696 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm21901-201ENSMUST00000189568 696 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm29424-201ENSMUST00000189716 696 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm28599-201ENSMUST00000189838 694 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm21867-201ENSMUST00000189917 696 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm29269-201ENSMUST00000190087 696 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm21722-201ENSMUST00000190153 696 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm28423-201ENSMUST00000190701 696 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm21899-201ENSMUST00000190745 696 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm21910-201ENSMUST00000191163 696 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm21849-201ENSMUST00000191571 696 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm28678-201ENSMUST00000191593 696 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm20910-201ENSMUST00000193268 696 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm21871-201ENSMUST00000194621 696 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm18206-201ENSMUST00000207027 926 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm1Q8VC85 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Gm15957-201ENSMUST00000118893 974 ntBASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Lsm1Q8VC85 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Gm44608-201ENSMUST00000206827 855 ntBASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm1Q8VC85 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm1Q8VC85 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms