Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gtf3c5Q8R2T8 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gtf3c5Q8R2T8 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Gtf3c5Q8R2T8 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gtf3c5Q8R2T8 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gtf3c5Q8R2T8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gtf3c5Q8R2T8 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Gtf3c5Q8R2T8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gtf3c5Q8R2T8 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gtf3c5Q8R2T8 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gtf3c5Q8R2T8 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gtf3c5Q8R2T8 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.71■□□□□ 0.27
Gtf3c5Q8R2T8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gtf3c5Q8R2T8 Gm13015-201ENSMUST00000118674 204 ntBASIC16.71■□□□□ 0.27
Gtf3c5Q8R2T8 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.71■□□□□ 0.27
Gtf3c5Q8R2T8 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.71■□□□□ 0.27
Gtf3c5Q8R2T8 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gtf3c5Q8R2T8 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Gtf3c5Q8R2T8 Adra1a-206ENSMUST00000225182 2337 ntBASIC16.71■□□□□ 0.27
Gtf3c5Q8R2T8 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gtf3c5Q8R2T8 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gtf3c5Q8R2T8 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gtf3c5Q8R2T8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gtf3c5Q8R2T8 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gtf3c5Q8R2T8 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Gtf3c5Q8R2T8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Gtf3c5Q8R2T8 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Gtf3c5Q8R2T8 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Gtf3c5Q8R2T8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Gtf3c5Q8R2T8 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.7■□□□□ 0.26
Gtf3c5Q8R2T8 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Gm12882-201ENSMUST00000121696 517 ntBASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Gm9719-201ENSMUST00000162765 543 ntBASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Gm18766-201ENSMUST00000189811 808 ntBASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gtf3c5Q8R2T8 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms