Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx54Q8K4L0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx54Q8K4L0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx54Q8K4L0 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx54Q8K4L0 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx54Q8K4L0 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
Ddx54Q8K4L0 Gm25927-201ENSMUST00000175058 117 ntBASIC18.34■□□□□ 0.53
Ddx54Q8K4L0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ddx54Q8K4L0 Gm16505-201ENSMUST00000179981 232 ntBASIC18.34■□□□□ 0.53
Ddx54Q8K4L0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx54Q8K4L0 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx54Q8K4L0 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx54Q8K4L0 Mir497b-201ENSMUST00000093601 125 ntBASIC18.34■□□□□ 0.53
Ddx54Q8K4L0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx54Q8K4L0 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx54Q8K4L0 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx54Q8K4L0 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx54Q8K4L0 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx54Q8K4L0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx54Q8K4L0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
Ddx54Q8K4L0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx54Q8K4L0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Ddx54Q8K4L0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx54Q8K4L0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx54Q8K4L0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx54Q8K4L0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx54Q8K4L0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx54Q8K4L0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Ddx54Q8K4L0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx54Q8K4L0 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Ddx54Q8K4L0 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx54Q8K4L0 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx54Q8K4L0 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC18.33■□□□□ 0.52
Ddx54Q8K4L0 Gm6621-201ENSMUST00000193251 772 ntBASIC18.33■□□□□ 0.52
Ddx54Q8K4L0 Gm8227-201ENSMUST00000223306 571 ntBASIC18.33■□□□□ 0.52
Ddx54Q8K4L0 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx54Q8K4L0 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Ddx54Q8K4L0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Ddx54Q8K4L0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx54Q8K4L0 Gm8706-201ENSMUST00000197372 1491 ntBASIC18.33■□□□□ 0.52
Ddx54Q8K4L0 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC18.33■□□□□ 0.52
Ddx54Q8K4L0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx54Q8K4L0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 AC154462.2-201ENSMUST00000227519 370 ntBASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Itm2b-204ENSMUST00000228637 783 ntBASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx54Q8K4L0 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Gm13786-201ENSMUST00000122371 333 ntBASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Gm25668-201ENSMUST00000157700 129 ntBASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 AC132384.14-201ENSMUST00000219346 1147 ntBASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx54Q8K4L0 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms