Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.24□□□□□ -0.29
Cpne1Q8C166 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Gm9719-201ENSMUST00000162765 543 ntBASIC13.24□□□□□ -0.29
Cpne1Q8C166 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.24□□□□□ -0.29
Cpne1Q8C166 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.23□□□□□ -0.29
Cpne1Q8C166 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Gm27631-201ENSMUST00000184163 466 ntBASIC13.23□□□□□ -0.29
Cpne1Q8C166 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne1Q8C166 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne1Q8C166 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.22□□□□□ -0.29
Cpne1Q8C166 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.22□□□□□ -0.29
Cpne1Q8C166 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Gm28630-201ENSMUST00000187806 498 ntBASIC13.22□□□□□ -0.29
Cpne1Q8C166 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.22□□□□□ -0.29
Cpne1Q8C166 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.22□□□□□ -0.29
Cpne1Q8C166 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne1Q8C166 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.22□□□□□ -0.29
Cpne1Q8C166 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cpne1Q8C166 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.22□□□□□ -0.29
Cpne1Q8C166 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne1Q8C166 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Cpne1Q8C166 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne1Q8C166 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne1Q8C166 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne1Q8C166 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cpne1Q8C166 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cpne1Q8C166 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne1Q8C166 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Cpne1Q8C166 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms