Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Gm6973-201ENSMUST00000117080 721 ntBASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Gm11543-201ENSMUST00000120758 370 ntBASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Gm5312-201ENSMUST00000203728 547 ntBASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh20Q8BIZ0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Gm43125-201ENSMUST00000201724 730 ntBASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms