Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk3bQ80YF6 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Gm13597-201ENSMUST00000121239 375 ntBASIC11.95□□□□□ -0.5
Upk3bQ80YF6 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Gm15590-201ENSMUST00000078419 552 ntBASIC11.95□□□□□ -0.5
Upk3bQ80YF6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Upk3bQ80YF6 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Mir8098-201ENSMUST00000184011 137 ntBASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Gm27628-201ENSMUST00000184911 107 ntBASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Matn2-206ENSMUST00000228570 2798 ntBASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Upk3bQ80YF6 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms