Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nucks1Q80XU3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.12■□□□□ 0.01
Nucks1Q80XU3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.12■□□□□ 0.01
Nucks1Q80XU3 Gm38225-201ENSMUST00000194001 393 ntBASIC15.12■□□□□ 0.01
Nucks1Q80XU3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nucks1Q80XU3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Nucks1Q80XU3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nucks1Q80XU3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nucks1Q80XU3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nucks1Q80XU3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nucks1Q80XU3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nucks1Q80XU3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nucks1Q80XU3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nucks1Q80XU3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nucks1Q80XU3 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nucks1Q80XU3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nucks1Q80XU3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nucks1Q80XU3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nucks1Q80XU3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nucks1Q80XU3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nucks1Q80XU3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nucks1Q80XU3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nucks1Q80XU3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nucks1Q80XU3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nucks1Q80XU3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Nucks1Q80XU3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nucks1Q80XU3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nucks1Q80XU3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nucks1Q80XU3 Gm11745-201ENSMUST00000121669 448 ntBASIC15.11■□□□□ 0.01
Nucks1Q80XU3 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
Nucks1Q80XU3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.11■□□□□ 0.01
Nucks1Q80XU3 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.11■□□□□ 0.01
Nucks1Q80XU3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nucks1Q80XU3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Nucks1Q80XU3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nucks1Q80XU3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nucks1Q80XU3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nucks1Q80XU3 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.11■□□□□ 0.01
Nucks1Q80XU3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nucks1Q80XU3 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nucks1Q80XU3 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nucks1Q80XU3 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nucks1Q80XU3 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nucks1Q80XU3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nucks1Q80XU3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Gm44771-201ENSMUST00000206975 626 ntBASIC15.1■□□□□ 0.01
Nucks1Q80XU3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nucks1Q80XU3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nucks1Q80XU3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Nucks1Q80XU3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.09■□□□□ 0.01
Nucks1Q80XU3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nucks1Q80XU3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nucks1Q80XU3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nucks1Q80XU3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Nucks1Q80XU3 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nucks1Q80XU3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms