Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Gm43703-201ENSMUST00000200523 763 ntBASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Gm7775-201ENSMUST00000218871 853 ntBASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Gm9063-201ENSMUST00000223299 582 ntBASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rnf139Q7TMV1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Gm18027-201ENSMUST00000218947 619 ntBASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf139Q7TMV1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Gm15460-201ENSMUST00000118147 391 ntBASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Gm37714-201ENSMUST00000194742 342 ntBASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf139Q7TMV1 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf139Q7TMV1 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf139Q7TMV1 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Rnf139Q7TMV1 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.09■□□□□ 0.01
Rnf139Q7TMV1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf139Q7TMV1 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rnf139Q7TMV1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf139Q7TMV1 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms