Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf4Q6PFF0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Gm9385-201ENSMUST00000117563 472 ntBASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf4Q6PFF0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf4Q6PFF0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Gm9103-201ENSMUST00000119371 405 ntBASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms