Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Gm38671-201ENSMUST00000200573 130 ntBASIC16.38■□□□□ 0.21
Nup98Q6PFD9 AC126253.1-201ENSMUST00000227974 824 ntBASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Nup98Q6PFD9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Gm42550-201ENSMUST00000201553 960 ntBASIC16.38■□□□□ 0.21
Nup98Q6PFD9 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Gm27847-201ENSMUST00000183711 107 ntBASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Gm27375-201ENSMUST00000183799 107 ntBASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 AC155237.1-201ENSMUST00000226196 1279 ntBASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup98Q6PFD9 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Abhd6-203ENSMUST00000225234 1958 ntBASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Gm12742-201ENSMUST00000117326 410 ntBASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Gm18054-201ENSMUST00000207539 555 ntBASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Nup98Q6PFD9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup98Q6PFD9 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Gm5687-201ENSMUST00000118252 640 ntBASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Gm7029-201ENSMUST00000173226 450 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms