Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Six4Q61321 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Six4Q61321 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Six4Q61321 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.25□□□□□ -0.13
Six4Q61321 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.25□□□□□ -0.13
Six4Q61321 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Six4Q61321 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Six4Q61321 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Six4Q61321 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Six4Q61321 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Six4Q61321 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Six4Q61321 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Six4Q61321 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.25□□□□□ -0.13
Six4Q61321 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Six4Q61321 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.25□□□□□ -0.13
Six4Q61321 Gm4875-201ENSMUST00000118257 786 ntBASIC14.25□□□□□ -0.13
Six4Q61321 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.25□□□□□ -0.13
Six4Q61321 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Six4Q61321 Auts2-212ENSMUST00000178555 309 ntBASIC14.25□□□□□ -0.13
Six4Q61321 Gm27989-201ENSMUST00000184721 107 ntBASIC14.25□□□□□ -0.13
Six4Q61321 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.25□□□□□ -0.13
Six4Q61321 Gm20949-201ENSMUST00000206478 952 ntBASIC14.25□□□□□ -0.13
Six4Q61321 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.25□□□□□ -0.13
Six4Q61321 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Six4Q61321 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Six4Q61321 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Six4Q61321 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Six4Q61321 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Six4Q61321 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Six4Q61321 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.25□□□□□ -0.13
Six4Q61321 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Six4Q61321 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Six4Q61321 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Six4Q61321 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Six4Q61321 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Six4Q61321 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.25□□□□□ -0.13
Six4Q61321 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Six4Q61321 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Six4Q61321 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.25□□□□□ -0.13
Six4Q61321 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Six4Q61321 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Six4Q61321 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six4Q61321 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six4Q61321 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six4Q61321 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.24□□□□□ -0.13
Six4Q61321 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six4Q61321 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six4Q61321 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six4Q61321 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.24□□□□□ -0.13
Six4Q61321 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Six4Q61321 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six4Q61321 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Six4Q61321 Gm3436-201ENSMUST00000179930 840 ntBASIC14.24□□□□□ -0.13
Six4Q61321 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.24□□□□□ -0.13
Six4Q61321 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six4Q61321 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six4Q61321 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six4Q61321 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Six4Q61321 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six4Q61321 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Six4Q61321 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six4Q61321 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six4Q61321 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six4Q61321 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.24□□□□□ -0.13
Six4Q61321 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six4Q61321 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six4Q61321 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six4Q61321 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six4Q61321 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Six4Q61321 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six4Q61321 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six4Q61321 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six4Q61321 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Six4Q61321 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.23□□□□□ -0.13
Six4Q61321 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six4Q61321 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six4Q61321 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six4Q61321 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Six4Q61321 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.23□□□□□ -0.13
Six4Q61321 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six4Q61321 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Six4Q61321 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.23□□□□□ -0.13
Six4Q61321 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.23□□□□□ -0.13
Six4Q61321 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six4Q61321 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Six4Q61321 Gm15487-201ENSMUST00000122373 465 ntBASIC14.23□□□□□ -0.13
Six4Q61321 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.23□□□□□ -0.13
Six4Q61321 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.23□□□□□ -0.13
Six4Q61321 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.23□□□□□ -0.13
Six4Q61321 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six4Q61321 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six4Q61321 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Six4Q61321 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.23□□□□□ -0.13
Six4Q61321 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Six4Q61321 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Six4Q61321 Mir7023-201ENSMUST00000185093 64 ntBASIC14.23□□□□□ -0.13
Six4Q61321 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Six4Q61321 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.23□□□□□ -0.13
Six4Q61321 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six4Q61321 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms