Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Gm11591-201ENSMUST00000120063 702 ntBASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Gm8927-201ENSMUST00000181978 981 ntBASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Arhgef33-207ENSMUST00000224966 490 ntBASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Gm13097-201ENSMUST00000210722 397 ntBASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Spg11Q3UHA3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Gm15276-201ENSMUST00000145953 498 ntBASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Gm44967-201ENSMUST00000207047 631 ntBASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Gm11618-201ENSMUST00000117946 267 ntBASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Gm38317-201ENSMUST00000195564 343 ntBASIC12.87□□□□□ -0.35
Spg11Q3UHA3 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Gm30285-201ENSMUST00000214614 422 ntBASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Spg11Q3UHA3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms