Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Gm44771-201ENSMUST00000206975 626 ntBASIC12.24□□□□□ -0.45
Atf1P81269 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf1P81269 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.24□□□□□ -0.45
Atf1P81269 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.24□□□□□ -0.45
Atf1P81269 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf1P81269 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.24□□□□□ -0.45
Atf1P81269 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.24□□□□□ -0.45
Atf1P81269 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf1P81269 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf1P81269 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf1P81269 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf1P81269 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf1P81269 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atf1P81269 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Atf1P81269 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.24□□□□□ -0.45
Atf1P81269 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf1P81269 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Atf1P81269 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atf1P81269 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Atf1P81269 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf1P81269 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf1P81269 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atf1P81269 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atf1P81269 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf1P81269 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Atf1P81269 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Atf1P81269 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.23□□□□□ -0.45
Atf1P81269 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Atf1P81269 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Atf1P81269 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.23□□□□□ -0.45
Atf1P81269 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Atf1P81269 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.23□□□□□ -0.45
Atf1P81269 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Atf1P81269 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.23□□□□□ -0.45
Atf1P81269 Gm11745-201ENSMUST00000121669 448 ntBASIC12.23□□□□□ -0.45
Atf1P81269 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.23□□□□□ -0.45
Atf1P81269 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.23□□□□□ -0.45
Atf1P81269 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.23□□□□□ -0.45
Atf1P81269 AW822252-206ENSMUST00000208904 237 ntBASIC12.23□□□□□ -0.45
Atf1P81269 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.23□□□□□ -0.45
Atf1P81269 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.23□□□□□ -0.45
Atf1P81269 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Atf1P81269 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.23□□□□□ -0.45
Atf1P81269 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Atf1P81269 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Atf1P81269 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atf1P81269 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Atf1P81269 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf1P81269 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf1P81269 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atf1P81269 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf1P81269 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf1P81269 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf1P81269 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.22□□□□□ -0.45
Atf1P81269 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf1P81269 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf1P81269 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.22□□□□□ -0.45
Atf1P81269 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf1P81269 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf1P81269 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf1P81269 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.22□□□□□ -0.45
Atf1P81269 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf1P81269 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Atf1P81269 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf1P81269 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Atf1P81269 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf1P81269 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf1P81269 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Atf1P81269 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Atf1P81269 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf1P81269 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atf1P81269 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atf1P81269 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.22□□□□□ -0.45
Atf1P81269 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.22□□□□□ -0.45
Atf1P81269 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Atf1P81269 Gm27525-201ENSMUST00000184465 107 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms