Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC10.77□□□□□ -0.69
Vamp3P63024 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.77□□□□□ -0.69
Vamp3P63024 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Vamp3P63024 Gm37133-201ENSMUST00000192705 1922 ntBASIC10.77□□□□□ -0.69
Vamp3P63024 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Vamp3P63024 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.77□□□□□ -0.69
Vamp3P63024 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.77□□□□□ -0.69
Vamp3P63024 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.77□□□□□ -0.69
Vamp3P63024 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Vamp3P63024 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Vamp3P63024 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Vamp3P63024 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Vamp3P63024 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Vamp3P63024 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Vamp3P63024 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Vamp3P63024 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Vamp3P63024 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Vamp3P63024 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.77□□□□□ -0.69
Vamp3P63024 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Vamp3P63024 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Vamp3P63024 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Vamp3P63024 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.76□□□□□ -0.69
Vamp3P63024 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.76□□□□□ -0.69
Vamp3P63024 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Vamp3P63024 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Vamp3P63024 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Vamp3P63024 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Vamp3P63024 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Vamp3P63024 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC10.76□□□□□ -0.69
Vamp3P63024 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC10.76□□□□□ -0.69
Vamp3P63024 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Vamp3P63024 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.75□□□□□ -0.69
Vamp3P63024 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.75□□□□□ -0.69
Vamp3P63024 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Vamp3P63024 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Vamp3P63024 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 Gm11539-201ENSMUST00000119837 557 ntBASIC10.75□□□□□ -0.69
Vamp3P63024 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC10.75□□□□□ -0.69
Vamp3P63024 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Vamp3P63024 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.75□□□□□ -0.69
Vamp3P63024 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 AC124581.1-201ENSMUST00000225416 1399 ntBASIC10.75□□□□□ -0.69
Vamp3P63024 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.75□□□□□ -0.69
Vamp3P63024 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Vamp3P63024 Dio3-201ENSMUST00000097228 1449 ntBASIC10.75□□□□□ -0.69
Vamp3P63024 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Vamp3P63024 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC10.74□□□□□ -0.69
Vamp3P63024 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vamp3P63024 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms