Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox3P53784 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox3P53784 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox3P53784 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox3P53784 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox3P53784 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox3P53784 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox3P53784 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox3P53784 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox3P53784 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Sox3P53784 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox3P53784 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox3P53784 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox3P53784 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Sox3P53784 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox3P53784 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox3P53784 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Sox3P53784 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox3P53784 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Sox3P53784 Gm22189-201ENSMUST00000103822 86 ntBASIC13.56□□□□□ -0.24
Sox3P53784 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.56□□□□□ -0.24
Sox3P53784 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.56□□□□□ -0.24
Sox3P53784 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.56□□□□□ -0.24
Sox3P53784 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.56□□□□□ -0.24
Sox3P53784 Gm14722-201ENSMUST00000118943 689 ntBASIC13.56□□□□□ -0.24
Sox3P53784 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.56□□□□□ -0.24
Sox3P53784 Gm15483-201ENSMUST00000120338 456 ntBASIC13.56□□□□□ -0.24
Sox3P53784 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.56□□□□□ -0.24
Sox3P53784 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox3P53784 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox3P53784 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox3P53784 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox3P53784 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.56□□□□□ -0.24
Sox3P53784 Gm15823-201ENSMUST00000064305 670 ntBASIC13.56□□□□□ -0.24
Sox3P53784 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Sox3P53784 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox3P53784 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox3P53784 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox3P53784 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox3P53784 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox3P53784 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox3P53784 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox3P53784 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox3P53784 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Sox3P53784 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox3P53784 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Sox3P53784 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox3P53784 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sox3P53784 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox3P53784 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox3P53784 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox3P53784 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox3P53784 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Sox3P53784 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox3P53784 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox3P53784 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox3P53784 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox3P53784 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox3P53784 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Sox3P53784 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox3P53784 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.55□□□□□ -0.24
Sox3P53784 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox3P53784 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox3P53784 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox3P53784 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.55□□□□□ -0.24
Sox3P53784 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox3P53784 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Sox3P53784 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox3P53784 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox3P53784 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Sox3P53784 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox3P53784 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox3P53784 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox3P53784 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox3P53784 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.55□□□□□ -0.24
Sox3P53784 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox3P53784 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox3P53784 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox3P53784 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.55□□□□□ -0.24
Sox3P53784 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.54□□□□□ -0.24
Sox3P53784 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox3P53784 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox3P53784 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox3P53784 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox3P53784 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox3P53784 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.54□□□□□ -0.24
Sox3P53784 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox3P53784 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sox3P53784 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox3P53784 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.54□□□□□ -0.24
Sox3P53784 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox3P53784 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox3P53784 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox3P53784 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox3P53784 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox3P53784 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox3P53784 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.54□□□□□ -0.24
Sox3P53784 Gm10499-201ENSMUST00000174094 934 ntBASIC13.54□□□□□ -0.24
Sox3P53784 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.54□□□□□ -0.24
Sox3P53784 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms