Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SftpbP50405 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.47□□□□□ -0.09
SftpbP50405 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SftpbP50405 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SftpbP50405 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.47□□□□□ -0.09
SftpbP50405 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SftpbP50405 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.47□□□□□ -0.09
SftpbP50405 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SftpbP50405 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.47□□□□□ -0.09
SftpbP50405 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.47□□□□□ -0.09
SftpbP50405 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SftpbP50405 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.47□□□□□ -0.09
SftpbP50405 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SftpbP50405 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SftpbP50405 Rpph1-201ENSMUST00000175096 319 ntBASIC14.47□□□□□ -0.09
SftpbP50405 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SftpbP50405 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SftpbP50405 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SftpbP50405 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SftpbP50405 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.47□□□□□ -0.09
SftpbP50405 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SftpbP50405 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SftpbP50405 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SftpbP50405 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SftpbP50405 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SftpbP50405 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SftpbP50405 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SftpbP50405 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SftpbP50405 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SftpbP50405 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
SftpbP50405 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SftpbP50405 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SftpbP50405 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SftpbP50405 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SftpbP50405 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SftpbP50405 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SftpbP50405 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SftpbP50405 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.46□□□□□ -0.09
SftpbP50405 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.46□□□□□ -0.09
SftpbP50405 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SftpbP50405 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SftpbP50405 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SftpbP50405 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SftpbP50405 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SftpbP50405 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SftpbP50405 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SftpbP50405 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SftpbP50405 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.46□□□□□ -0.09
SftpbP50405 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.46□□□□□ -0.09
SftpbP50405 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.46□□□□□ -0.09
SftpbP50405 Gm9727-201ENSMUST00000161387 555 ntBASIC14.46□□□□□ -0.09
SftpbP50405 Gm5364-201ENSMUST00000216789 889 ntBASIC14.46□□□□□ -0.09
SftpbP50405 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.46□□□□□ -0.09
SftpbP50405 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SftpbP50405 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SftpbP50405 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SftpbP50405 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SftpbP50405 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SftpbP50405 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SftpbP50405 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SftpbP50405 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SftpbP50405 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
SftpbP50405 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SftpbP50405 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SftpbP50405 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SftpbP50405 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SftpbP50405 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.45□□□□□ -0.1
SftpbP50405 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SftpbP50405 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SftpbP50405 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SftpbP50405 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SftpbP50405 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SftpbP50405 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SftpbP50405 Gm1401-201ENSMUST00000122048 772 ntBASIC14.45□□□□□ -0.1
SftpbP50405 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SftpbP50405 Gm10275-202ENSMUST00000168697 495 ntBASIC14.45□□□□□ -0.1
SftpbP50405 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SftpbP50405 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SftpbP50405 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.45□□□□□ -0.1
SftpbP50405 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.45□□□□□ -0.1
SftpbP50405 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.45□□□□□ -0.1
SftpbP50405 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SftpbP50405 Gm10275-201ENSMUST00000092620 635 ntBASIC14.45□□□□□ -0.1
SftpbP50405 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SftpbP50405 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SftpbP50405 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SftpbP50405 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SftpbP50405 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SftpbP50405 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SftpbP50405 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.45□□□□□ -0.1
SftpbP50405 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SftpbP50405 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SftpbP50405 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SftpbP50405 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SftpbP50405 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SftpbP50405 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.44□□□□□ -0.1
SftpbP50405 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SftpbP50405 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SftpbP50405 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SftpbP50405 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms