Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.72□□□□□ -0.53
Nkx2-1P50220 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.72□□□□□ -0.53
Nkx2-1P50220 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.72□□□□□ -0.53
Nkx2-1P50220 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.72□□□□□ -0.53
Nkx2-1P50220 Mir8098-201ENSMUST00000184011 137 ntBASIC11.72□□□□□ -0.53
Nkx2-1P50220 Gm2451-201ENSMUST00000199447 999 ntBASIC11.72□□□□□ -0.53
Nkx2-1P50220 Gm10290-201ENSMUST00000200451 999 ntBASIC11.72□□□□□ -0.53
Nkx2-1P50220 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.72□□□□□ -0.53
Nkx2-1P50220 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Nkx2-1P50220 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Nkx2-1P50220 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-1P50220 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-1P50220 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-1P50220 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-1P50220 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-1P50220 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-1P50220 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-1P50220 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-1P50220 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-1P50220 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-1P50220 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-1P50220 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-1P50220 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-1P50220 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-1P50220 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-1P50220 Gm11764-201ENSMUST00000120221 623 ntBASIC11.71□□□□□ -0.53
Nkx2-1P50220 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-1P50220 Gm7230-201ENSMUST00000173026 815 ntBASIC11.71□□□□□ -0.53
Nkx2-1P50220 Gm28659-201ENSMUST00000188013 759 ntBASIC11.71□□□□□ -0.53
Nkx2-1P50220 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.71□□□□□ -0.53
Nkx2-1P50220 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Nkx2-1P50220 Gm18246-201ENSMUST00000221023 728 ntBASIC11.71□□□□□ -0.53
Nkx2-1P50220 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-1P50220 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-1P50220 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-1P50220 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-1P50220 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx2-1P50220 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Nkx2-1P50220 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx2-1P50220 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx2-1P50220 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx2-1P50220 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx2-1P50220 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx2-1P50220 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx2-1P50220 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx2-1P50220 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.71□□□□□ -0.54
Nkx2-1P50220 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx2-1P50220 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.7□□□□□ -0.54
Nkx2-1P50220 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.7□□□□□ -0.54
Nkx2-1P50220 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Nkx2-1P50220 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Gm7862-201ENSMUST00000121461 292 ntBASIC11.7□□□□□ -0.54
Nkx2-1P50220 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.7□□□□□ -0.54
Nkx2-1P50220 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC11.7□□□□□ -0.54
Nkx2-1P50220 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Gm9182-201ENSMUST00000217829 639 ntBASIC11.7□□□□□ -0.54
Nkx2-1P50220 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-1P50220 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms