Protein–RNA interactions for Protein: P40694

Ighmbp2, DNA-binding protein SMUBP-2, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighmbp2P40694 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighmbp2P40694 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighmbp2P40694 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
Ighmbp2P40694 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighmbp2P40694 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighmbp2P40694 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighmbp2P40694 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighmbp2P40694 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.15■□□□□ 0.02
Ighmbp2P40694 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighmbp2P40694 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighmbp2P40694 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighmbp2P40694 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ighmbp2P40694 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.15■□□□□ 0.02
Ighmbp2P40694 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.15■□□□□ 0.02
Ighmbp2P40694 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighmbp2P40694 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Gm17968-201ENSMUST00000194902 784 ntBASIC15.14■□□□□ 0.01
Ighmbp2P40694 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.14■□□□□ 0.01
Ighmbp2P40694 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Ighmbp2P40694 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.14■□□□□ 0.01
Ighmbp2P40694 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.13■□□□□ 0.01
Ighmbp2P40694 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Gm13597-201ENSMUST00000121239 375 ntBASIC15.13■□□□□ 0.01
Ighmbp2P40694 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighmbp2P40694 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighmbp2P40694 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ighmbp2P40694 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ighmbp2P40694 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ighmbp2P40694 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Ighmbp2P40694 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms