Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Rfc1P35601 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc1P35601 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc1P35601 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc1P35601 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc1P35601 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.91□□□□□ -0.02
Rfc1P35601 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Rfc1P35601 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc1P35601 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.91□□□□□ -0.02
Rfc1P35601 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Rfc1P35601 Gm6376-201ENSMUST00000209407 580 ntBASIC14.91□□□□□ -0.02
Rfc1P35601 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Rfc1P35601 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.91□□□□□ -0.02
Rfc1P35601 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.91□□□□□ -0.02
Rfc1P35601 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc1P35601 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc1P35601 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc1P35601 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc1P35601 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc1P35601 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc1P35601 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc1P35601 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc1P35601 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Rfc1P35601 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Rfc1P35601 Gm7153-201ENSMUST00000117092 455 ntBASIC14.9□□□□□ -0.02
Rfc1P35601 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.9□□□□□ -0.02
Rfc1P35601 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Rfc1P35601 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.9□□□□□ -0.02
Rfc1P35601 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.9□□□□□ -0.02
Rfc1P35601 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Rfc1P35601 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc1P35601 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.89□□□□□ -0.03
Rfc1P35601 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.89□□□□□ -0.03
Rfc1P35601 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.89□□□□□ -0.03
Rfc1P35601 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc1P35601 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc1P35601 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc1P35601 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc1P35601 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc1P35601 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Rfc1P35601 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc1P35601 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc1P35601 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.89□□□□□ -0.03
Rfc1P35601 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.89□□□□□ -0.03
Rfc1P35601 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc1P35601 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc1P35601 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Rfc1P35601 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc1P35601 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc1P35601 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc1P35601 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Rfc1P35601 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc1P35601 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc1P35601 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc1P35601 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc1P35601 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc1P35601 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc1P35601 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Rfc1P35601 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Rfc1P35601 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfc1P35601 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Rfc1P35601 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfc1P35601 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfc1P35601 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfc1P35601 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfc1P35601 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfc1P35601 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfc1P35601 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rfc1P35601 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Rfc1P35601 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rfc1P35601 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfc1P35601 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rfc1P35601 Gm5682-201ENSMUST00000173402 505 ntBASIC14.88□□□□□ -0.03
Rfc1P35601 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
Rfc1P35601 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfc1P35601 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfc1P35601 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms