Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a1P31648 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a1P31648 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.18□□□□□ -0.46
Slc6a1P31648 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a1P31648 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a1P31648 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Slc6a1P31648 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a1P31648 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Slc6a1P31648 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Slc6a1P31648 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.17□□□□□ -0.46
Slc6a1P31648 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.17□□□□□ -0.46
Slc6a1P31648 Gm12350-201ENSMUST00000121208 462 ntBASIC12.17□□□□□ -0.46
Slc6a1P31648 Gm1401-201ENSMUST00000122048 772 ntBASIC12.17□□□□□ -0.46
Slc6a1P31648 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.17□□□□□ -0.46
Slc6a1P31648 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.17□□□□□ -0.46
Slc6a1P31648 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.17□□□□□ -0.46
Slc6a1P31648 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.17□□□□□ -0.46
Slc6a1P31648 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Slc6a1P31648 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.17□□□□□ -0.46
Slc6a1P31648 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Slc6a1P31648 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Slc6a1P31648 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.17□□□□□ -0.46
Slc6a1P31648 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc6a1P31648 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Slc6a1P31648 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Slc6a1P31648 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.16□□□□□ -0.46
Slc6a1P31648 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Slc6a1P31648 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.16□□□□□ -0.46
Slc6a1P31648 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.16□□□□□ -0.46
Slc6a1P31648 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.16□□□□□ -0.46
Slc6a1P31648 Gm8584-201ENSMUST00000171982 758 ntBASIC12.16□□□□□ -0.46
Slc6a1P31648 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Slc6a1P31648 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.16□□□□□ -0.46
Slc6a1P31648 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.16□□□□□ -0.46
Slc6a1P31648 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.16□□□□□ -0.46
Slc6a1P31648 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.16□□□□□ -0.46
Slc6a1P31648 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a1P31648 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.15□□□□□ -0.46
Slc6a1P31648 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Slc6a1P31648 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.15□□□□□ -0.46
Slc6a1P31648 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Slc6a1P31648 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms