Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.84■□□□□ 0.13
Col2a1P28481 Mir1982-201ENSMUST00000157368 74 ntBASIC15.84■□□□□ 0.13
Col2a1P28481 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Col2a1P28481 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Col2a1P28481 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.84■□□□□ 0.13
Col2a1P28481 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col2a1P28481 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col2a1P28481 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Col2a1P28481 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.83■□□□□ 0.13
Col2a1P28481 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col2a1P28481 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Col2a1P28481 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Col2a1P28481 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.83■□□□□ 0.13
Col2a1P28481 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.13
Col2a1P28481 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col2a1P28481 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col2a1P28481 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.83■□□□□ 0.13
Col2a1P28481 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col2a1P28481 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.83■□□□□ 0.12
Col2a1P28481 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col2a1P28481 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col2a1P28481 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col2a1P28481 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col2a1P28481 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.83■□□□□ 0.12
Col2a1P28481 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.83■□□□□ 0.12
Col2a1P28481 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col2a1P28481 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col2a1P28481 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.83■□□□□ 0.12
Col2a1P28481 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col2a1P28481 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col2a1P28481 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col2a1P28481 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col2a1P28481 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col2a1P28481 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.83■□□□□ 0.12
Col2a1P28481 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.83■□□□□ 0.12
Col2a1P28481 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.83■□□□□ 0.12
Col2a1P28481 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col2a1P28481 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.83■□□□□ 0.12
Col2a1P28481 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col2a1P28481 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col2a1P28481 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.83■□□□□ 0.12
Col2a1P28481 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.83■□□□□ 0.12
Col2a1P28481 Gm9899-201ENSMUST00000065519 555 ntBASIC15.83■□□□□ 0.12
Col2a1P28481 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col2a1P28481 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.83■□□□□ 0.12
Col2a1P28481 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col2a1P28481 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col2a1P28481 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col2a1P28481 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.83■□□□□ 0.12
Col2a1P28481 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.83■□□□□ 0.12
Col2a1P28481 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col2a1P28481 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Col2a1P28481 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.82■□□□□ 0.12
Col2a1P28481 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.82■□□□□ 0.12
Col2a1P28481 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Gm27847-201ENSMUST00000183711 107 ntBASIC15.82■□□□□ 0.12
Col2a1P28481 Gm27375-201ENSMUST00000183799 107 ntBASIC15.82■□□□□ 0.12
Col2a1P28481 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.82■□□□□ 0.12
Col2a1P28481 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.82■□□□□ 0.12
Col2a1P28481 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.82■□□□□ 0.12
Col2a1P28481 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.82■□□□□ 0.12
Col2a1P28481 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.82■□□□□ 0.12
Col2a1P28481 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col2a1P28481 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Col2a1P28481 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col2a1P28481 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col2a1P28481 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col2a1P28481 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col2a1P28481 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col2a1P28481 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col2a1P28481 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col2a1P28481 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.81■□□□□ 0.12
Col2a1P28481 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col2a1P28481 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.81■□□□□ 0.12
Col2a1P28481 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col2a1P28481 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms