Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Clk1P22518 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.22□□□□□ -0.29
Clk1P22518 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Clk1P22518 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clk1P22518 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clk1P22518 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.21□□□□□ -0.29
Clk1P22518 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clk1P22518 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Clk1P22518 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Clk1P22518 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clk1P22518 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clk1P22518 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clk1P22518 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clk1P22518 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.21□□□□□ -0.29
Clk1P22518 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.21□□□□□ -0.29
Clk1P22518 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.21□□□□□ -0.29
Clk1P22518 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.21□□□□□ -0.29
Clk1P22518 Gm24513-201ENSMUST00000174964 138 ntBASIC13.21□□□□□ -0.29
Clk1P22518 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clk1P22518 Gm27397-201ENSMUST00000184997 107 ntBASIC13.21□□□□□ -0.29
Clk1P22518 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Clk1P22518 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clk1P22518 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Clk1P22518 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clk1P22518 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clk1P22518 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Clk1P22518 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clk1P22518 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clk1P22518 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clk1P22518 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Clk1P22518 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.21□□□□□ -0.3
Clk1P22518 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clk1P22518 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clk1P22518 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clk1P22518 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Clk1P22518 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Clk1P22518 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.2□□□□□ -0.3
Clk1P22518 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.2□□□□□ -0.3
Clk1P22518 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Clk1P22518 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.2□□□□□ -0.3
Clk1P22518 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.2□□□□□ -0.3
Clk1P22518 Gm15483-201ENSMUST00000120338 456 ntBASIC13.2□□□□□ -0.3
Clk1P22518 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.2□□□□□ -0.3
Clk1P22518 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.2□□□□□ -0.3
Clk1P22518 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.2□□□□□ -0.3
Clk1P22518 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.2□□□□□ -0.3
Clk1P22518 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.2□□□□□ -0.3
Clk1P22518 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Clk1P22518 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.2□□□□□ -0.3
Clk1P22518 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clk1P22518 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.2□□□□□ -0.3
Clk1P22518 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Clk1P22518 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Clk1P22518 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.19□□□□□ -0.3
Clk1P22518 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms