Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Nid1P10493 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.25□□□□□ -0.29
Nid1P10493 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.25□□□□□ -0.29
Nid1P10493 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.25□□□□□ -0.29
Nid1P10493 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.25□□□□□ -0.29
Nid1P10493 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Nid1P10493 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.25□□□□□ -0.29
Nid1P10493 Gm27631-201ENSMUST00000184163 466 ntBASIC13.25□□□□□ -0.29
Nid1P10493 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Nid1P10493 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Nid1P10493 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nid1P10493 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.24□□□□□ -0.29
Nid1P10493 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nid1P10493 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Nid1P10493 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.24□□□□□ -0.29
Nid1P10493 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.24□□□□□ -0.29
Nid1P10493 Gm9824-201ENSMUST00000178707 561 ntBASIC13.24□□□□□ -0.29
Nid1P10493 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 Gm29541-201ENSMUST00000191351 678 ntBASIC13.24□□□□□ -0.29
Nid1P10493 Gm43514-201ENSMUST00000198852 424 ntBASIC13.24□□□□□ -0.29
Nid1P10493 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nid1P10493 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nid1P10493 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Nid1P10493 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nid1P10493 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Nid1P10493 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.24□□□□□ -0.29
Nid1P10493 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nid1P10493 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Nid1P10493 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nid1P10493 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nid1P10493 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Nid1P10493 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nid1P10493 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nid1P10493 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nid1P10493 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nid1P10493 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nid1P10493 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Nid1P10493 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.23□□□□□ -0.29
Nid1P10493 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nid1P10493 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nid1P10493 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nid1P10493 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nid1P10493 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nid1P10493 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nid1P10493 AA543401-201ENSMUST00000164248 1269 ntBASIC13.23□□□□□ -0.29
Nid1P10493 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.23□□□□□ -0.29
Nid1P10493 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.23□□□□□ -0.29
Nid1P10493 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.23□□□□□ -0.29
Nid1P10493 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.23□□□□□ -0.29
Nid1P10493 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms