Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxb3P09026 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Hoxb3P09026 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxb3P09026 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxb3P09026 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxb3P09026 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hoxb3P09026 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxb3P09026 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxb3P09026 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxb3P09026 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxb3P09026 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hoxb3P09026 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hoxb3P09026 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxb3P09026 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hoxb3P09026 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxb3P09026 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxb3P09026 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxb3P09026 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxb3P09026 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.04□□□□□ -0.16
Hoxb3P09026 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.04□□□□□ -0.16
Hoxb3P09026 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.04□□□□□ -0.16
Hoxb3P09026 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC14.04□□□□□ -0.16
Hoxb3P09026 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC14.04□□□□□ -0.16
Hoxb3P09026 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxb3P09026 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxb3P09026 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxb3P09026 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxb3P09026 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxb3P09026 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.04□□□□□ -0.16
Hoxb3P09026 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.03□□□□□ -0.16
Hoxb3P09026 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.03□□□□□ -0.16
Hoxb3P09026 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.03□□□□□ -0.16
Hoxb3P09026 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hoxb3P09026 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.03□□□□□ -0.16
Hoxb3P09026 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Hoxb3P09026 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.03□□□□□ -0.16
Hoxb3P09026 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 B9d1os-201ENSMUST00000137010 674 ntBASIC14.03□□□□□ -0.16
Hoxb3P09026 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Hoxb3P09026 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.03□□□□□ -0.16
Hoxb3P09026 Gm36943-201ENSMUST00000194422 282 ntBASIC14.03□□□□□ -0.16
Hoxb3P09026 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.03□□□□□ -0.16
Hoxb3P09026 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hoxb3P09026 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hoxb3P09026 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Hoxb3P09026 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hoxb3P09026 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Hoxb3P09026 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxb3P09026 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.03□□□□□ -0.16
Hoxb3P09026 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxb3P09026 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxb3P09026 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxb3P09026 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxb3P09026 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxb3P09026 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxb3P09026 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Hoxb3P09026 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.02□□□□□ -0.16
Hoxb3P09026 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxb3P09026 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxb3P09026 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxb3P09026 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxb3P09026 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Hoxb3P09026 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.02□□□□□ -0.16
Hoxb3P09026 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.02□□□□□ -0.17
Hoxb3P09026 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxb3P09026 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxb3P09026 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.02□□□□□ -0.17
Hoxb3P09026 Gm21854-201ENSMUST00000179901 471 ntBASIC14.02□□□□□ -0.17
Hoxb3P09026 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.02□□□□□ -0.17
Hoxb3P09026 Gm2383-201ENSMUST00000181461 807 ntBASIC14.02□□□□□ -0.17
Hoxb3P09026 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxb3P09026 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms