Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa4P06798 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa4P06798 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Hoxa4P06798 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Hoxa4P06798 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa4P06798 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.88□□□□□ -0.19
Hoxa4P06798 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa4P06798 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Hoxa4P06798 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa4P06798 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa4P06798 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Hoxa4P06798 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa4P06798 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Hoxa4P06798 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa4P06798 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa4P06798 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa4P06798 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa4P06798 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa4P06798 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.88□□□□□ -0.19
Hoxa4P06798 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa4P06798 Gm22189-201ENSMUST00000103822 86 ntBASIC13.88□□□□□ -0.19
Hoxa4P06798 Gm15240-201ENSMUST00000118156 720 ntBASIC13.88□□□□□ -0.19
Hoxa4P06798 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.88□□□□□ -0.19
Hoxa4P06798 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa4P06798 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.88□□□□□ -0.19
Hoxa4P06798 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa4P06798 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Hoxa4P06798 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.88□□□□□ -0.19
Hoxa4P06798 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.88□□□□□ -0.19
Hoxa4P06798 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.88□□□□□ -0.19
Hoxa4P06798 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.88□□□□□ -0.19
Hoxa4P06798 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Hoxa4P06798 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Hoxa4P06798 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa4P06798 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa4P06798 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa4P06798 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa4P06798 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Hoxa4P06798 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa4P06798 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa4P06798 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.88□□□□□ -0.19
Hoxa4P06798 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Hoxa4P06798 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Hoxa4P06798 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.87□□□□□ -0.19
Hoxa4P06798 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.87□□□□□ -0.19
Hoxa4P06798 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.87□□□□□ -0.19
Hoxa4P06798 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Mir698-201ENSMUST00000102164 109 ntBASIC13.87□□□□□ -0.19
Hoxa4P06798 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Gm24420-201ENSMUST00000176676 59 ntBASIC13.87□□□□□ -0.19
Hoxa4P06798 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.87□□□□□ -0.19
Hoxa4P06798 Mir6977-201ENSMUST00000184960 64 ntBASIC13.87□□□□□ -0.19
Hoxa4P06798 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Gm7730-201ENSMUST00000212486 454 ntBASIC13.87□□□□□ -0.19
Hoxa4P06798 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Hoxa4P06798 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Hoxa4P06798 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Hoxa4P06798 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Hoxa4P06798 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.87□□□□□ -0.19
Hoxa4P06798 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxa4P06798 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.86□□□□□ -0.19
Hoxa4P06798 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxa4P06798 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxa4P06798 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Hoxa4P06798 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxa4P06798 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxa4P06798 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.86□□□□□ -0.19
Hoxa4P06798 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxa4P06798 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.86□□□□□ -0.19
Hoxa4P06798 Gm13385-201ENSMUST00000121089 220 ntBASIC13.86□□□□□ -0.19
Hoxa4P06798 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.86□□□□□ -0.19
Hoxa4P06798 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Hoxa4P06798 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.86□□□□□ -0.19
Hoxa4P06798 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.86□□□□□ -0.19
Hoxa4P06798 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms