Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
TcraP01849 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Gm5837-201ENSMUST00000191844 1369 ntBASIC10.33□□□□□ -0.76
TcraP01849 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.33□□□□□ -0.76
TcraP01849 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
TcraP01849 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
TcraP01849 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
TcraP01849 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC10.33□□□□□ -0.76
TcraP01849 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
TcraP01849 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
TcraP01849 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
TcraP01849 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC10.32□□□□□ -0.76
TcraP01849 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.32□□□□□ -0.76
TcraP01849 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC10.32□□□□□ -0.76
TcraP01849 Gm7506-201ENSMUST00000207758 815 ntBASIC10.32□□□□□ -0.76
TcraP01849 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Gm8655-201ENSMUST00000221159 852 ntBASIC10.32□□□□□ -0.76
TcraP01849 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC10.32□□□□□ -0.76
TcraP01849 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
TcraP01849 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC10.32□□□□□ -0.76
TcraP01849 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.32□□□□□ -0.76
TcraP01849 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
TcraP01849 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
TcraP01849 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC10.32□□□□□ -0.76
TcraP01849 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
TcraP01849 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC10.31□□□□□ -0.76
TcraP01849 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.31□□□□□ -0.76
TcraP01849 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
TcraP01849 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
TcraP01849 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC10.31□□□□□ -0.76
TcraP01849 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
TcraP01849 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
TcraP01849 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
TcraP01849 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
TcraP01849 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
TcraP01849 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
TcraP01849 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
TcraP01849 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
TcraP01849 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
TcraP01849 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC10.31□□□□□ -0.76
TcraP01849 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
TcraP01849 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
TcraP01849 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
TcraP01849 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
TcraP01849 Gm25927-201ENSMUST00000175058 117 ntBASIC10.31□□□□□ -0.76
TcraP01849 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC10.31□□□□□ -0.76
TcraP01849 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
TcraP01849 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC10.31□□□□□ -0.76
TcraP01849 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
TcraP01849 Gm18669-201ENSMUST00000216049 778 ntBASIC10.31□□□□□ -0.76
TcraP01849 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
TcraP01849 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
TcraP01849 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms