Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.5□□□□□ -0.25
Vti1bO88384 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Vti1bO88384 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Vti1bO88384 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.49□□□□□ -0.25
Vti1bO88384 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Vti1bO88384 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.49□□□□□ -0.25
Vti1bO88384 Gm4995-201ENSMUST00000117247 432 ntBASIC13.49□□□□□ -0.25
Vti1bO88384 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.49□□□□□ -0.25
Vti1bO88384 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.49□□□□□ -0.25
Vti1bO88384 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.49□□□□□ -0.25
Vti1bO88384 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.49□□□□□ -0.25
Vti1bO88384 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Vti1bO88384 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Vti1bO88384 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.49□□□□□ -0.25
Vti1bO88384 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.49□□□□□ -0.25
Vti1bO88384 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Vti1bO88384 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Vti1bO88384 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1bO88384 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.48□□□□□ -0.25
Vti1bO88384 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.48□□□□□ -0.25
Vti1bO88384 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Vti1bO88384 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Vti1bO88384 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.48□□□□□ -0.25
Vti1bO88384 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.48□□□□□ -0.25
Vti1bO88384 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.48□□□□□ -0.25
Vti1bO88384 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Gm20553-201ENSMUST00000204205 844 ntBASIC13.48□□□□□ -0.25
Vti1bO88384 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.48□□□□□ -0.25
Vti1bO88384 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.48□□□□□ -0.25
Vti1bO88384 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.48□□□□□ -0.25
Vti1bO88384 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.48□□□□□ -0.25
Vti1bO88384 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Vti1bO88384 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.48□□□□□ -0.25
Vti1bO88384 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Vti1bO88384 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Vti1bO88384 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.48□□□□□ -0.25
Vti1bO88384 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1bO88384 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1bO88384 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1bO88384 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Vti1bO88384 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1bO88384 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1bO88384 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1bO88384 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms