Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn2O70591 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn2O70591 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn2O70591 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.84□□□□□ -0.51
Pfdn2O70591 Gm37744-201ENSMUST00000194616 1590 ntBASIC11.84□□□□□ -0.51
Pfdn2O70591 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn2O70591 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Pfdn2O70591 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn2O70591 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn2O70591 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Pfdn2O70591 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn2O70591 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn2O70591 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Pfdn2O70591 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn2O70591 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn2O70591 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn2O70591 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn2O70591 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.83□□□□□ -0.52
Pfdn2O70591 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.83□□□□□ -0.52
Pfdn2O70591 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.83□□□□□ -0.52
Pfdn2O70591 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn2O70591 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn2O70591 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn2O70591 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn2O70591 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn2O70591 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pfdn2O70591 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn2O70591 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.83□□□□□ -0.52
Pfdn2O70591 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn2O70591 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn2O70591 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn2O70591 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn2O70591 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn2O70591 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn2O70591 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn2O70591 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn2O70591 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn2O70591 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.82□□□□□ -0.52
Pfdn2O70591 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn2O70591 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn2O70591 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn2O70591 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn2O70591 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.82□□□□□ -0.52
Pfdn2O70591 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn2O70591 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn2O70591 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn2O70591 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.82□□□□□ -0.52
Pfdn2O70591 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn2O70591 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC11.82□□□□□ -0.52
Pfdn2O70591 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn2O70591 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC11.82□□□□□ -0.52
Pfdn2O70591 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.82□□□□□ -0.52
Pfdn2O70591 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn2O70591 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn2O70591 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn2O70591 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pfdn2O70591 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn2O70591 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn2O70591 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn2O70591 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pfdn2O70591 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.82□□□□□ -0.52
Pfdn2O70591 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pfdn2O70591 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn2O70591 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.81□□□□□ -0.52
Pfdn2O70591 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.81□□□□□ -0.52
Pfdn2O70591 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.81□□□□□ -0.52
Pfdn2O70591 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.81□□□□□ -0.52
Pfdn2O70591 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.81□□□□□ -0.52
Pfdn2O70591 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pfdn2O70591 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.81□□□□□ -0.52
Pfdn2O70591 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pfdn2O70591 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pfdn2O70591 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Pfdn2O70591 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Pfdn2O70591 Gm19324-201ENSMUST00000213229 1169 ntBASIC11.81□□□□□ -0.52
Pfdn2O70591 Gm18669-201ENSMUST00000216049 778 ntBASIC11.81□□□□□ -0.52
Pfdn2O70591 AC158538.1-201ENSMUST00000225870 294 ntBASIC11.81□□□□□ -0.52
Pfdn2O70591 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.81□□□□□ -0.52
Pfdn2O70591 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pfdn2O70591 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn2O70591 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms