Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Pde6dO55057 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Pde6dO55057 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.14□□□□□ -0.63
Pde6dO55057 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Pde6dO55057 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.14□□□□□ -0.63
Pde6dO55057 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.13□□□□□ -0.63
Pde6dO55057 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.13□□□□□ -0.63
Pde6dO55057 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Pde6dO55057 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Pde6dO55057 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Pde6dO55057 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Pde6dO55057 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Pde6dO55057 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Pde6dO55057 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Gm9182-201ENSMUST00000217829 639 ntBASIC11.13□□□□□ -0.63
Pde6dO55057 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.13□□□□□ -0.63
Pde6dO55057 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Pde6dO55057 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.13□□□□□ -0.63
Pde6dO55057 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pde6dO55057 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Pde6dO55057 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pde6dO55057 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pde6dO55057 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pde6dO55057 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Gm8097-201ENSMUST00000117903 829 ntBASIC11.12□□□□□ -0.63
Pde6dO55057 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC11.12□□□□□ -0.63
Pde6dO55057 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC11.12□□□□□ -0.63
Pde6dO55057 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.12□□□□□ -0.63
Pde6dO55057 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.12□□□□□ -0.63
Pde6dO55057 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.12□□□□□ -0.63
Pde6dO55057 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Pde6dO55057 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.12□□□□□ -0.63
Pde6dO55057 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms