Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Mir497b-201ENSMUST00000093601 125 ntBASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb9E9Q5G2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb9E9Q5G2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb9E9Q5G2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
Pcdhb9E9Q5G2 Gm15240-201ENSMUST00000118156 720 ntBASIC16.58■□□□□ 0.24
Pcdhb9E9Q5G2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb9E9Q5G2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhb9E9Q5G2 Gm28760-201ENSMUST00000185995 736 ntBASIC16.58■□□□□ 0.24
Pcdhb9E9Q5G2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhb9E9Q5G2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb9E9Q5G2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.58■□□□□ 0.24
Pcdhb9E9Q5G2 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Pcdhb9E9Q5G2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb9E9Q5G2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb9E9Q5G2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhb9E9Q5G2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb9E9Q5G2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb9E9Q5G2 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb9E9Q5G2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb9E9Q5G2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb9E9Q5G2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Pcdhb9E9Q5G2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Gm6912-201ENSMUST00000117218 544 ntBASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Gm8927-201ENSMUST00000181978 981 ntBASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms