Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm8885-201ENSMUST00000189382 598 ntBASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Gm8969-201ENSMUST00000199694 526 ntBASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Gm11354-201ENSMUST00000121974 422 ntBASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Gm11470-201ENSMUST00000118868 1475 ntBASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Gm44262-201ENSMUST00000204969 372 ntBASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a3E9PWQ3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a3E9PWQ3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a3E9PWQ3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Col6a3E9PWQ3 Gm7848-201ENSMUST00000210739 718 ntBASIC13.79□□□□□ -0.2
Col6a3E9PWQ3 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Col6a3E9PWQ3 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a3E9PWQ3 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
Col6a3E9PWQ3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Col6a3E9PWQ3 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a3E9PWQ3 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.79□□□□□ -0.2
Col6a3E9PWQ3 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a3E9PWQ3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a3E9PWQ3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Col6a3E9PWQ3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Col6a3E9PWQ3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a3E9PWQ3 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Col6a3E9PWQ3 Gm44405-201ENSMUST00000198952 126 ntBASIC13.79□□□□□ -0.2
Col6a3E9PWQ3 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a3E9PWQ3 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.79□□□□□ -0.2
Col6a3E9PWQ3 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a3E9PWQ3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Gm8927-201ENSMUST00000181978 981 ntBASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a3E9PWQ3 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms