Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Gm13392-201ENSMUST00000117708 150 ntBASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Gm7561-201ENSMUST00000211203 886 ntBASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.3■□□□□ 0.2
Clrn2B2RVW2 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Gm11814-201ENSMUST00000119515 929 ntBASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Gm45784-201ENSMUST00000188360 142 ntBASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Gm45331-201ENSMUST00000209868 554 ntBASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Mir497b-201ENSMUST00000093601 125 ntBASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Clrn2B2RVW2 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn2B2RVW2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.29■□□□□ 0.2
Clrn2B2RVW2 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Gm27847-201ENSMUST00000183711 107 ntBASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Gm27375-201ENSMUST00000183799 107 ntBASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.29■□□□□ 0.2
Clrn2B2RVW2 AC122459.1-201ENSMUST00000228373 885 ntBASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn2B2RVW2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn2B2RVW2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn2B2RVW2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn2B2RVW2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn2B2RVW2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn2B2RVW2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn2B2RVW2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn2B2RVW2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn2B2RVW2 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn2B2RVW2 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.28■□□□□ 0.2
Clrn2B2RVW2 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.28■□□□□ 0.2
Clrn2B2RVW2 Gm14660-201ENSMUST00000119809 575 ntBASIC16.28■□□□□ 0.2
Clrn2B2RVW2 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn2B2RVW2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn2B2RVW2 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.28■□□□□ 0.2
Clrn2B2RVW2 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn2B2RVW2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn2B2RVW2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms