Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Gm17271-201ENSMUST00000165535 355 ntBASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Gm37230-201ENSMUST00000194491 818 ntBASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Gm18206-201ENSMUST00000207027 926 ntBASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Mir3113-201ENSMUST00000175478 76 ntBASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Mir8117-201ENSMUST00000184773 107 ntBASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5-4A0A075B652 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Gm15427-201ENSMUST00000117288 531 ntBASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Rpph1-201ENSMUST00000175096 319 ntBASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms