Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Mir877-201ENSMUST00000104738 85 ntBASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Gm24420-201ENSMUST00000176676 59 ntBASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Gm43118-201ENSMUST00000199149 775 ntBASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-4Q9EQM3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Proscos-202ENSMUST00000178990 666 ntBASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-4Q9EQM3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Gm44608-201ENSMUST00000206827 855 ntBASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-4Q9EQM3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms