Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Gm37714-201ENSMUST00000194742 342 ntBASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Rrp8Q9DB85 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Gm27486-201ENSMUST00000184923 80 ntBASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.82□□□□□ -0.2
Rrp8Q9DB85 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.81□□□□□ -0.2
Rrp8Q9DB85 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.81□□□□□ -0.2
Rrp8Q9DB85 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Gm44608-201ENSMUST00000206827 855 ntBASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Gm18027-201ENSMUST00000218947 619 ntBASIC13.81□□□□□ -0.2
Rrp8Q9DB85 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp8Q9DB85 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms