Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim42Q9D2H5 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Trim42Q9D2H5 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms