Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim11Q99PQ2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim11Q99PQ2 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.14■□□□□ 0.17
Trim11Q99PQ2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim11Q99PQ2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim11Q99PQ2 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trim11Q99PQ2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim11Q99PQ2 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.14■□□□□ 0.17
Trim11Q99PQ2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.14■□□□□ 0.17
Trim11Q99PQ2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim11Q99PQ2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trim11Q99PQ2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trim11Q99PQ2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim11Q99PQ2 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim11Q99PQ2 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trim11Q99PQ2 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim11Q99PQ2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim11Q99PQ2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim11Q99PQ2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim11Q99PQ2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim11Q99PQ2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trim11Q99PQ2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim11Q99PQ2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim11Q99PQ2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim11Q99PQ2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim11Q99PQ2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim11Q99PQ2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim11Q99PQ2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim11Q99PQ2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
Trim11Q99PQ2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC16.13■□□□□ 0.17
Trim11Q99PQ2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim11Q99PQ2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim11Q99PQ2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim11Q99PQ2 Gm4995-201ENSMUST00000117247 432 ntBASIC16.13■□□□□ 0.17
Trim11Q99PQ2 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.13■□□□□ 0.17
Trim11Q99PQ2 Gm13365-201ENSMUST00000121188 973 ntBASIC16.13■□□□□ 0.17
Trim11Q99PQ2 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim11Q99PQ2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trim11Q99PQ2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.13■□□□□ 0.17
Trim11Q99PQ2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.13■□□□□ 0.17
Trim11Q99PQ2 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.13■□□□□ 0.17
Trim11Q99PQ2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trim11Q99PQ2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.13■□□□□ 0.17
Trim11Q99PQ2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim11Q99PQ2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim11Q99PQ2 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim11Q99PQ2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim11Q99PQ2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Gm15957-201ENSMUST00000118893 974 ntBASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Gm18049-201ENSMUST00000208909 581 ntBASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.12■□□□□ 0.17
Trim11Q99PQ2 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim11Q99PQ2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim11Q99PQ2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim11Q99PQ2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim11Q99PQ2 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.11■□□□□ 0.17
Trim11Q99PQ2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim11Q99PQ2 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim11Q99PQ2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim11Q99PQ2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim11Q99PQ2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim11Q99PQ2 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Trim11Q99PQ2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim11Q99PQ2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim11Q99PQ2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trim11Q99PQ2 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.11■□□□□ 0.17
Trim11Q99PQ2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim11Q99PQ2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms