Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim34aQ99PP6 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim34aQ99PP6 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trim34aQ99PP6 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim34aQ99PP6 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trim34aQ99PP6 Gm5912-201ENSMUST00000122282 1438 ntBASIC17.39■□□□□ 0.38
Trim34aQ99PP6 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Trim34aQ99PP6 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Gm15429-201ENSMUST00000151268 798 ntBASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Mir1938-201ENSMUST00000158746 100 ntBASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Gm2495-201ENSMUST00000191160 466 ntBASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Gm7067-201ENSMUST00000207698 1249 ntBASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim34aQ99PP6 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim34aQ99PP6 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim34aQ99PP6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim34aQ99PP6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim34aQ99PP6 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim34aQ99PP6 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.38■□□□□ 0.37
Trim34aQ99PP6 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim34aQ99PP6 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim34aQ99PP6 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim34aQ99PP6 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim34aQ99PP6 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim34aQ99PP6 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim34aQ99PP6 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim34aQ99PP6 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim34aQ99PP6 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim34aQ99PP6 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim34aQ99PP6 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim34aQ99PP6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim34aQ99PP6 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim34aQ99PP6 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim34aQ99PP6 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim34aQ99PP6 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim34aQ99PP6 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Gm12390-201ENSMUST00000117897 397 ntBASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Mir1982-201ENSMUST00000157368 74 ntBASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Gm27772-201ENSMUST00000184900 187 ntBASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Gm27486-201ENSMUST00000184923 80 ntBASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Gm43630-201ENSMUST00000201550 776 ntBASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.37■□□□□ 0.37
Trim34aQ99PP6 AC110817.1-201ENSMUST00000225706 605 ntBASIC17.37■□□□□ 0.37
Trim34aQ99PP6 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim34aQ99PP6 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.37■□□□□ 0.37
Trim34aQ99PP6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms