Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.82□□□□□ -0.2
Msh4Q99MT2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Gm9824-201ENSMUST00000178707 561 ntBASIC13.82□□□□□ -0.2
Msh4Q99MT2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.82□□□□□ -0.2
Msh4Q99MT2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.82□□□□□ -0.2
Msh4Q99MT2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Gm5479-201ENSMUST00000160578 435 ntBASIC13.81□□□□□ -0.2
Msh4Q99MT2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.81□□□□□ -0.2
Msh4Q99MT2 Gm22175-201ENSMUST00000175007 78 ntBASIC13.81□□□□□ -0.2
Msh4Q99MT2 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.81□□□□□ -0.2
Msh4Q99MT2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.81□□□□□ -0.2
Msh4Q99MT2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.81□□□□□ -0.2
Msh4Q99MT2 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.81□□□□□ -0.2
Msh4Q99MT2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.81□□□□□ -0.2
Msh4Q99MT2 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Msh4Q99MT2 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Msh4Q99MT2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.8□□□□□ -0.2
Msh4Q99MT2 Gm2451-201ENSMUST00000199447 999 ntBASIC13.8□□□□□ -0.2
Msh4Q99MT2 Gm10290-201ENSMUST00000200451 999 ntBASIC13.8□□□□□ -0.2
Msh4Q99MT2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms