Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm29310-201ENSMUST00000185468 696 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm21825-201ENSMUST00000185728 696 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm29109-201ENSMUST00000185895 696 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm21896-201ENSMUST00000186520 696 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm21873-201ENSMUST00000186728 696 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm21794-201ENSMUST00000187056 696 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm21880-201ENSMUST00000187275 696 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm21826-201ENSMUST00000187451 696 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm21198-201ENSMUST00000188393 696 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm21749-201ENSMUST00000189343 696 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm21901-201ENSMUST00000189568 696 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm29424-201ENSMUST00000189716 696 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm28599-201ENSMUST00000189838 694 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm21867-201ENSMUST00000189917 696 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm29269-201ENSMUST00000190087 696 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm21722-201ENSMUST00000190153 696 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm28423-201ENSMUST00000190701 696 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm21899-201ENSMUST00000190745 696 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm21910-201ENSMUST00000191163 696 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm21849-201ENSMUST00000191571 696 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm28678-201ENSMUST00000191593 696 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm20910-201ENSMUST00000193268 696 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm21871-201ENSMUST00000194621 696 ntBASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scrt1Q99M85 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Gm6222-201ENSMUST00000120787 396 ntBASIC12.41□□□□□ -0.42
Scrt1Q99M85 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.41□□□□□ -0.42
Scrt1Q99M85 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Gm21854-201ENSMUST00000179901 471 ntBASIC12.41□□□□□ -0.42
Scrt1Q99M85 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scrt1Q99M85 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Scrt1Q99M85 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms