Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Lysmd3Q99LE3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lysmd3Q99LE3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lysmd3Q99LE3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lysmd3Q99LE3 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lysmd3Q99LE3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lysmd3Q99LE3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lysmd3Q99LE3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Gm23547-201ENSMUST00000158210 271 ntBASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lysmd3Q99LE3 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Gm20445-201ENSMUST00000061905 565 ntBASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.69□□□□□ -0.06
Lysmd3Q99LE3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lysmd3Q99LE3 Syt7-205ENSMUST00000224135 1557 ntBASIC14.68□□□□□ -0.06
Lysmd3Q99LE3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lysmd3Q99LE3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lysmd3Q99LE3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lysmd3Q99LE3 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.68□□□□□ -0.06
Lysmd3Q99LE3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lysmd3Q99LE3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lysmd3Q99LE3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Lysmd3Q99LE3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lysmd3Q99LE3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lysmd3Q99LE3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lysmd3Q99LE3 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lysmd3Q99LE3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lysmd3Q99LE3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms