Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col20a1Q923P0 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col20a1Q923P0 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Gm24420-201ENSMUST00000176676 59 ntBASIC16.66■□□□□ 0.26
Col20a1Q923P0 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.66■□□□□ 0.26
Col20a1Q923P0 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col20a1Q923P0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.66■□□□□ 0.26
Col20a1Q923P0 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.66■□□□□ 0.26
Col20a1Q923P0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.66■□□□□ 0.26
Col20a1Q923P0 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.66■□□□□ 0.26
Col20a1Q923P0 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.65■□□□□ 0.26
Col20a1Q923P0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col20a1Q923P0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col20a1Q923P0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Col20a1Q923P0 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.65■□□□□ 0.26
Col20a1Q923P0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col20a1Q923P0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.65■□□□□ 0.26
Col20a1Q923P0 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col20a1Q923P0 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col20a1Q923P0 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col20a1Q923P0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col20a1Q923P0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col20a1Q923P0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col20a1Q923P0 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Col20a1Q923P0 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.65■□□□□ 0.26
Col20a1Q923P0 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.65■□□□□ 0.26
Col20a1Q923P0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col20a1Q923P0 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col20a1Q923P0 Gm11478-201ENSMUST00000117851 599 ntBASIC16.65■□□□□ 0.26
Col20a1Q923P0 Gm11918-201ENSMUST00000121660 179 ntBASIC16.65■□□□□ 0.26
Col20a1Q923P0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.65■□□□□ 0.26
Col20a1Q923P0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.65■□□□□ 0.26
Col20a1Q923P0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Col20a1Q923P0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.65■□□□□ 0.26
Col20a1Q923P0 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Col20a1Q923P0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col20a1Q923P0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col20a1Q923P0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col20a1Q923P0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Col20a1Q923P0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Col20a1Q923P0 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col20a1Q923P0 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col20a1Q923P0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.64■□□□□ 0.25
Col20a1Q923P0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col20a1Q923P0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Col20a1Q923P0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col20a1Q923P0 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.64■□□□□ 0.25
Col20a1Q923P0 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col20a1Q923P0 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.64■□□□□ 0.25
Col20a1Q923P0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col20a1Q923P0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Col20a1Q923P0 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col20a1Q923P0 Gm8927-201ENSMUST00000181978 981 ntBASIC16.64■□□□□ 0.25
Col20a1Q923P0 Mir7654-201ENSMUST00000185082 70 ntBASIC16.64■□□□□ 0.25
Col20a1Q923P0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.64■□□□□ 0.25
Col20a1Q923P0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.64■□□□□ 0.25
Col20a1Q923P0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.64■□□□□ 0.25
Col20a1Q923P0 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col20a1Q923P0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col20a1Q923P0 Gm3222-201ENSMUST00000071282 990 ntBASIC16.64■□□□□ 0.25
Col20a1Q923P0 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col20a1Q923P0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col20a1Q923P0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col20a1Q923P0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.63■□□□□ 0.25
Col20a1Q923P0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.63■□□□□ 0.25
Col20a1Q923P0 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.63■□□□□ 0.25
Col20a1Q923P0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms