Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf4Q8K4J2 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf4Q8K4J2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ebf4Q8K4J2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.92□□□□□ -0.34
Ebf4Q8K4J2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.92□□□□□ -0.34
Ebf4Q8K4J2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf4Q8K4J2 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf4Q8K4J2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ebf4Q8K4J2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf4Q8K4J2 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf4Q8K4J2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Gm11780-201ENSMUST00000136880 516 ntBASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Gm9682-201ENSMUST00000197505 556 ntBASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf4Q8K4J2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Gm10819-201ENSMUST00000099988 561 ntBASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf4Q8K4J2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Ebf4Q8K4J2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms