Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Gm6415-201ENSMUST00000118488 348 ntBASIC13.56□□□□□ -0.24
CroccQ8CJ40 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Shd-206ENSMUST00000225145 998 ntBASIC13.56□□□□□ -0.24
CroccQ8CJ40 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.56□□□□□ -0.24
CroccQ8CJ40 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Gm12882-201ENSMUST00000121696 517 ntBASIC13.55□□□□□ -0.24
CroccQ8CJ40 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Gm18766-201ENSMUST00000189811 808 ntBASIC13.55□□□□□ -0.24
CroccQ8CJ40 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.55□□□□□ -0.24
CroccQ8CJ40 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CroccQ8CJ40 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Gm27618-201ENSMUST00000183671 60 ntBASIC13.54□□□□□ -0.24
CroccQ8CJ40 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CroccQ8CJ40 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Mir6956-201ENSMUST00000183598 62 ntBASIC13.54□□□□□ -0.24
CroccQ8CJ40 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CroccQ8CJ40 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.54□□□□□ -0.24
CroccQ8CJ40 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CroccQ8CJ40 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CroccQ8CJ40 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CroccQ8CJ40 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CroccQ8CJ40 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CroccQ8CJ40 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CroccQ8CJ40 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CroccQ8CJ40 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CroccQ8CJ40 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CroccQ8CJ40 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CroccQ8CJ40 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CroccQ8CJ40 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CroccQ8CJ40 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms